Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911652.1_cds_XP_016461682.1_54979
CDS Infomation

[gene=LOC107784988] [db_xref=GeneID:107784988] [protein=OTU domain-containing protein 5-like] [protein_id=XP_016461682.1] [location=complement(join(67685..67899,68025..68199,68292..68357,68548..68693,68820..68898,69714..69791,72170..72331,72708..73382))] [gbkey=CDS]
Sequence

ATGACACGGATACTTGTTCAGCGAGGTTCTACAGGGTCTTCATCGTCGTTGTCAAACCAG
AACAGGTCATCAGTTTCACTCCCTGAATCATCTGCATCTTCTTCAGCTCCATTGCAGCCA
CAGGCTTCTAGCACTAGTCAGGTACCATCAGCTCTGGAAGATGACGAGTTGGTAGGAGAA
TTTCCAGAATCTATTGTCTTGGATGAGTTTTCAGTTGGTTCTTTCAACCACAAAGGTGAA
GGTGATGATGCTTCATTAGAAAACTTCAGCAGTGACAGAAGCCACCTTGAAGAAAAGATT
ATTGACAATGAGAAGATAGGTGATGGTGCTTTTGTCTGTGGGGACTCTGTAAAAGGATCT
AGTGGTTTAAGTGTTGAGGCAGCGGAAAATGAGGGAACTTCTGTGCAGGGGGCTAAAAGT
AGTTCGTGTCCACCTCCACCTCCTGTCCCACCTCCTAAACCTGTGTCTCTAAGCTGTAGT
CCAAGGAAATTTTCATCAGGTAGTTCAAATGCAGTGCTGTTAGGATCTGGGGAACTTGTT
GGGCGGCCTAATGTGTCAACTAGGACTTCACCTGCGGGATCTAGGCCATCCTCTCCGCGG
TCACACAGCGAAAGTGAAGGTTATAATAGTGCCGATGAGCAGAACCCCAAATTTGGATCC
TCACACAATGATATGGAGAGAGAGCACCAGTTTGAAAGTGATATTAGAAGAGCAAAAGGC
TTAGAAGTTAAGAAAATGCTGGAAGATGGGAACTGCCTCTTCCGTGCAGTTGCTGACCAA
GTATATGGTGATTCTGAAGCTTATGATTTGGTCAGGCAGATGTGCATCGACTACATGGAG
CGCGAAAGAGACCACTTTTCTCAGTTTATAACTGAAGGATTCACATCCTATTGCAAGAGA
AAAAGGAGAGACAAGGTTTACGGCAACAATGTGGAAATCCAAGCGTTATCTGAAATGTAT
AACCGCCCTATCCATATATATTCTTACAGCAACGAACCAATGAACACGTTCCATGGAAGT
TATAACTCAGACAGCCCTCCTATCCGTCTCAGTTATCATCATGGAAATCATTACAACTCC
CTTGTTGATCCTCGCCGATTAACAGTTGGTGCTGGGCTTGGGTTTAGCTCTCTGCAAGGG
ACAAACGTCAACAAGGATAAAGTAAAAGCTGCAATTAAAGCTCAACAGGACCAACAGATT
GATAACGCGCTTCTAGCTGAAGGACGCTTCTACTCAGATCTTGAGCTCACTGAAAAGGAG
ATGGAACGCATGGTGATCGAAGCTTCTAGGGCTGAGTATATTGCTCGTGATAGGTTTAGA
CAACAGCTTGGTTGTCAAGAGTCTTCCACATCCGGAGCTGAGCCGTCATCTTCAGGAGCT
AGGTCATCTGGAAGTGAGAAACGGCAGGAAGATGGGCTCTGCTTGCCAGATTCCACCTTT
AGCGACTGCATCCAGATTATGCTGTCGATGGGTTTTAGCTATCCACGAGTAATTGAGGCT
TATAGCTTATTTGGGGACGATGTGGATTCTATGGTTTGTTATCTTGTAGAAACCAGCAGT
AGCAGCAGACGCAGCAAAGGAAAAGCAACTGAATGA

Peptide Sequence

PEP ID

XP_016461682.1
PEP Infomation

PREDICTED: OTU domain-containing protein 5-like [Nicotiana tabacum]
Sequence

MTRILVQRGSTGSSSSLSNQNRSSVSLPESSASSSAPLQPQASSTSQVPSALEDDELVGE
FPESIVLDEFSVGSFNHKGEGDDASLENFSSDRSHLEEKIIDNEKIGDGAFVCGDSVKGS
SGLSVEAAENEGTSVQGAKSSSCPPPPPVPPPKPVSLSCSPRKFSSGSSNAVLLGSGELV
GRPNVSTRTSPAGSRPSSPRSHSESEGYNSADEQNPKFGSSHNDMEREHQFESDIRRAKG
LEVKKMLEDGNCLFRAVADQVYGDSEAYDLVRQMCIDYMERERDHFSQFITEGFTSYCKR
KRRDKVYGNNVEIQALSEMYNRPIHIYSYSNEPMNTFHGSYNSDSPPIRLSYHHGNHYNS
LVDPRRLTVGAGLGFSSLQGTNVNKDKVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKE
MERMVIEASRAEYIARDRFRQQLGCQESSTSGAEPSSSGARSSGSEKRQEDGLCLPDSTF
SDCIQIMLSMGFSYPRVIEAYSLFGDDVDSMVCYLVETSSSSRRSKGKATE

Transcript Sequence

Gene sequence data has not been registered.